df1b2variable Class Reference

Description not yet available. More...

#include <df1b2fun.h>

Public Member Functions
	df1b2variable (const do_naught_kludge &)
	df1b2variable (double d)
	Description not yet available. More...
	df1b2variable (void)
	Default constructor. More...
	df1b2variable (adkludge1 *)
	Description not yet available. More...
	df1b2variable (const random_effects_bounded_vector_info &rebv)
	Description not yet available. More...
	df1b2variable (const newadkludge *)
	Description not yet available. More...
	df1b2variable (const df1b2variable &v)
	Description not yet available. More...
virtual	~df1b2variable ()
	Destructor. More...
void	allocate (void)
	Description not yet available. More...
void	allocate (const char *)
	Description not yet available. More...
int	allocated (void)
void	deallocate (void)
	If no other copies exist, free df1b2variable::ptr. More...
int	get_local_nvar (void) const
void	initialize (void)
	Initialize. More...
void	initialize (const unsigned int n)
	Initialize nvariables. More...
df1b2variable &	operator*= (const df1b2variable &v)
	Description not yet available. More...
df1b2variable &	operator+= (const df1b2variable &v)
	Description not yet available. More...
df1b2variable &	operator-= (const df1b2variable &v)
	Description not yet available. More...
df1b2variable &	operator/= (const df1b2variable &v)
	Description not yet available. More...
df1b2variable &	operator= (const df3_one_variable &v)
df1b2variable &	operator= (const df3_two_variable &v)
	Description not yet available. More...
df1b2variable &	operator= (const df3_three_variable &v)
	Description not yet available. More...
df1b2variable &	operator= (const df1b2variable &v)
	Description not yet available. More...
void	operator= (double x)
	Assign with value d. More...
int	unallocated (void)
Public Member Functions inherited from df1b2_header
	df1b2_header ()
	Default constructor. More...
int &	get_ind_index ()
const int &	get_ind_index () const
double *	get_u () const
double *	get_u_bar () const
double *	get_u_bar_tilde () const
double *	get_u_dot () const
double *	get_u_dot_bar () const
double *	get_u_dot_bar_tilde () const
double *	get_u_dot_tilde () const
double *	get_u_tilde () const

Static Public Member Functions
static unsigned int	get_blocksize (void)
	Description not yet available. More...
static unsigned int	get_blocksize (const unsigned int n)
	Description not yet available. More...
static unsigned int	get_nvar ()
static int	get_passnumber (void)
static void	increment_adpool_counter (void)
	Description not yet available. More...
static void	restore_adpool_pointer (void)
	Description not yet available. More...
static void	save_adpool_pointer (void)
	Description not yet available. More...
static void	set_blocksize (void)
	Description not yet available. More...
static void	set_maxder (int n)
static void	set_minder (int n)
static void	set_nvar (unsigned int n)

Public Attributes
short int *	ncopies
double *	ptr
Public Attributes inherited from df1b2_header
int	indindex
double *	u
double *	u_bar
double *	u_bar_tilde
double *	u_dot
double *	u_dot_bar
double *	u_dot_bar_tilde
double *	u_dot_tilde
double *	u_tilde

Static Public Attributes
static int	adpool_counter =0
static unsigned int	adpool_nvar_stack []
static adpool *	adpool_stack []
static int	adpool_stack_pointer =0
static const int	adpool_stack_size =50
static int	adpool_use_index []
static adpool *	adpool_vector []
static const int	adpool_vectorsize =_FIVE_
static int	allocation_counter =0
static unsigned int	blocksize =0
static int	current_allocation_index =0
static int	maxder =0
static int	minder =0
static int	noallocate =0
static unsigned int	nvar = 0
static unsigned int	nvar_vector []
static int	passnumber =0
static adpool *	pool = NULL
static int	pool_allocation_number []

Detailed Description

Description not yet available.

Parameters

Definition at line 266 of file df1b2fun.h.

Constructor & Destructor Documentation

df1b2variable::df1b2variable ( const do_naught_kludge &  )

inline

Definition at line 309 of file df1b2fun.h.

df1b2variable::df1b2variable

(

double

d

)

Description not yet available.

Parameters

Definition at line 54 of file df1b2fn5.cpp.

df1b2variable::df1b2variable

(

void

)

Default constructor.

Definition at line 81 of file df1b2fn5.cpp.

df1b2variable::df1b2variable

(

adkludge1 *

adkludgexxx

)

Description not yet available.

Parameters

Definition at line 157 of file df1b2fn5.cpp.

df1b2variable::df1b2variable

(

const random_effects_bounded_vector_info &

rebv

)

Description not yet available.

Parameters

Definition at line 1014 of file df1b2fn2.cpp.

df1b2variable::df1b2variable

(

const newadkludge *

z

)

Description not yet available.

Parameters

Definition at line 106 of file df1b2fn5.cpp.

df1b2variable::df1b2variable

(

const df1b2variable &

v

)

Description not yet available.

Parameters

Definition at line 198 of file df1b2fn2.cpp.

df1b2variable::~df1b2variable ( )

virtual

Destructor.

Definition at line 279 of file df1b2fn2.cpp.

Member Function Documentation

void df1b2variable::allocate

(

void

)

Description not yet available.

Parameters

Definition at line 126 of file df1b2fn5.cpp.

Referenced by funnel_init_df1b2variable::allocate(), allocate(), df1b2_init_number::allocate(), df1b2_init_bounded_number::allocate(), re_objective_function_value::allocate(), df1b2variable(), and init_df1b2vector::reallocate().

void df1b2variable::allocate

(

const char *

s

)

Description not yet available.

Parameters

Definition at line 285 of file df1b2f15.cpp.

int df1b2variable::allocated ( void  )

inline

Definition at line 271 of file df1b2fun.h.

Referenced by operator=().

void df1b2variable::deallocate

(

void

)

If no other copies exist, free df1b2variable::ptr.

Definition at line 286 of file df1b2fn2.cpp.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::check_hessian_type(), laplace_approximation_calculator::check_hessian_type2(), laplace_approximation_calculator::get_newton_raphson_info_banded(), and ~df1b2variable().

unsigned int df1b2variable::get_blocksize ( void  )

static

Description not yet available.

Parameters

Definition at line 70 of file df1b2fn2.cpp.

Referenced by initialize(), and set_blocksize().

unsigned int df1b2variable::get_blocksize ( const unsigned int  n )

static

Description not yet available.

Parameters

Definition at line 79 of file df1b2fn2.cpp.

int df1b2variable::get_local_nvar ( void  ) const

inline

Definition at line 270 of file df1b2fun.h.

static unsigned int df1b2variable::get_nvar ( )

inlinestatic

Definition at line 298 of file df1b2fun.h.

Referenced by set_blocksize().

static int df1b2variable::get_passnumber ( void  )

inlinestatic

Definition at line 296 of file df1b2fun.h.

Referenced by test_smartlist::check_buffer_size(), fixed_smartlist::check_buffer_size(), fixed_smartlist2::check_buffer_size(), fixed_smartlist::operator++(), fixed_smartlist2::operator++(), test_smartlist::operator+=(), fixed_smartlist::operator+=(), and fixed_smartlist2::operator+=().

void df1b2variable::increment_adpool_counter ( void  )

static

Description not yet available.

Parameters

Definition at line 24 of file df1b2glo.cpp.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::check_pool_size(), and laplace_approximation_calculator::laplace_approximation_calculator().

void df1b2variable::initialize

(

void

)

Initialize.

Definition at line 129 of file df1b2fn2.cpp.

Referenced by allocate(), df1b2variable(), operator=(), init_df1b2variable::operator=(), and init_df1b2variable::set_u_dot().

void df1b2variable::initialize

(

const unsigned int

n

)

Initialize nvariables.

/param n nvariables

Definition at line 146 of file df1b2fn2.cpp.

df1b2variable & df1b2variable::operator*=

(

const df1b2variable &

v

)

Description not yet available.

Parameters

Definition at line 434 of file df1b2fun.cpp.

df1b2variable & df1b2variable::operator+=

(

const df1b2variable &

_x

)

Description not yet available.

Parameters

Definition at line 129 of file df1b2fn3.cpp.

df1b2variable & df1b2variable::operator-=

(

const df1b2variable &

_x

)

Description not yet available.

Parameters

Definition at line 25 of file df1b2fn8.cpp.

df1b2variable & df1b2variable::operator/=

(

const df1b2variable &

v

)

Description not yet available.

Parameters

Definition at line 443 of file df1b2fun.cpp.

df1b2variable & df1b2variable::operator=

(

const df3_one_variable &

v

)

Definition at line 779 of file df3fun.cpp.

Referenced by funnel_dependent_df1b2variable::funnel_dependent_df1b2variable(), df1b2_init_number::operator=(), re_objective_function_value::operator=(), and funnel_init_df1b2variable::set_value().

df1b2variable & df1b2variable::operator=

(

const df3_two_variable &

v

)

Description not yet available.

Parameters

Definition at line 1246 of file df32fun.cpp.

df1b2variable & df1b2variable::operator=

(

const df3_three_variable &

v

)

Description not yet available.

Parameters

Definition at line 49 of file df33fun.cpp.

df1b2variable & df1b2variable::operator=

(

const df1b2variable &

_x

)

Description not yet available.

Parameters

Definition at line 30 of file df1b2fn4.cpp.

void df1b2variable::operator=

(

double

d

)

Assign with value d.

Parameters

d

new value

Definition at line 36 of file df1b2fn5.cpp.

void df1b2variable::restore_adpool_pointer ( void  )

static

Description not yet available.

Parameters

Definition at line 55 of file df1b2fun.cpp.

void df1b2variable::save_adpool_pointer ( void  )

static

Description not yet available.

Parameters

Definition at line 40 of file df1b2fun.cpp.

void df1b2variable::set_blocksize ( void  )

static

Description not yet available.

Parameters

Definition at line 89 of file df1b2fn2.cpp.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::check_pool_size(), and laplace_approximation_calculator::laplace_approximation_calculator().

static void df1b2variable::set_maxder ( int  n )

inlinestatic

Definition at line 300 of file df1b2fun.h.

Referenced by laplace_approximation_calculator::laplace_approximation_calculator().

static void df1b2variable::set_minder ( int  n )

inlinestatic

Definition at line 299 of file df1b2fun.h.

Referenced by laplace_approximation_calculator::laplace_approximation_calculator().

static void df1b2variable::set_nvar ( unsigned int  n )

inlinestatic

Definition at line 297 of file df1b2fun.h.

Referenced by laplace_approximation_calculator::laplace_approximation_calculator().

int df1b2variable::unallocated ( void  )

inline

Definition at line 272 of file df1b2fun.h.

Member Data Documentation

int df1b2variable::adpool_counter =0

static

Definition at line 279 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), check_pool_depths(), laplace_approximation_calculator::check_pool_size(), cleanup_laplace_stuff(), increment_adpool_counter(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::limited_memory_quasi_newton_block(), function_minimizer::prof_minimize_re(), function_minimizer::quasi_newton_block(), and function_minimizer::trust_region_update().

unsigned int df1b2variable::adpool_nvar_stack

static

Definition at line 284 of file df1b2fun.h.

Referenced by restore_adpool_pointer(), and save_adpool_pointer().

adpool * df1b2variable::adpool_stack

static

Definition at line 283 of file df1b2fun.h.

Referenced by restore_adpool_pointer(), and save_adpool_pointer().

int df1b2variable::adpool_stack_pointer =0

static

Definition at line 285 of file df1b2fun.h.

Referenced by restore_adpool_pointer(), and save_adpool_pointer().

const int df1b2variable::adpool_stack_size =50

static

Definition at line 281 of file df1b2fun.h.

Referenced by save_adpool_pointer().

int df1b2variable::adpool_use_index

static

Definition at line 275 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all().

adpool * df1b2variable::adpool_vector

static

Definition at line 282 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), check_pool_depths(), laplace_approximation_calculator::check_pool_size(), cleanup_laplace_stuff(), laplace_approximation_calculator::do_separable_stuff(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::limited_memory_quasi_newton_block(), function_minimizer::prof_minimize_re(), function_minimizer::quasi_newton_block(), and function_minimizer::trust_region_update().

const int df1b2variable::adpool_vectorsize =_FIVE_

static

Definition at line 278 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), and laplace_approximation_calculator::check_pool_size().

int df1b2variable::allocation_counter =0

static

Definition at line 277 of file df1b2fun.h.

unsigned int df1b2variable::blocksize =0

static

Definition at line 293 of file df1b2fun.h.

Referenced by df1b2variable(), and set_blocksize().

int df1b2variable::current_allocation_index =0

static

Definition at line 274 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all().

int df1b2variable::maxder =0

static

Definition at line 292 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::default_calculations_check_derivatives(), laplace_approximation_calculator::get_complete_hessian(), laplace_approximation_calculator::get_newton_raphson_info(), get_second_ders(), init_df1b2variable::init_df1b2variable(), init_df1b2variable::operator=(), set_maxder(), and init_df1b2variable::set_u_dot().

int df1b2variable::minder =0

static

Definition at line 291 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::default_calculations_check_derivatives(), laplace_approximation_calculator::get_complete_hessian(), laplace_approximation_calculator::get_newton_raphson_info(), get_second_ders(), init_df1b2variable::init_df1b2variable(), init_df1b2variable::operator=(), set_minder(), and init_df1b2variable::set_u_dot().

short int* df1b2variable::ncopies

Definition at line 304 of file df1b2fun.h.

Referenced by allocate(), deallocate(), df1b2variable(), and operator=().

int df1b2variable::noallocate =0

static

Definition at line 294 of file df1b2fun.h.

Referenced by df1b2_init_number::allocate(), df1b2variable(), funnel_init_bounded_df1b2vector::funnel_init_bounded_df1b2vector(), funnel_init_df1b2matrix::funnel_init_df1b2matrix(), funnel_init_df1b2vector::funnel_init_df1b2vector(), df1b2vector::noallocate(), and df1b2quadratic_prior::operator=().

unsigned int df1b2variable::nvar = 0

static

Definition at line 290 of file df1b2fun.h.

Referenced by allocate(), funnel_init_var::allocate_all(), asin(), betacf(), laplace_approximation_calculator::check_pool_size(), check_second_derivatives(), check_third_derivatives(), cos(), df1b2variable(), div(), laplace_approximation_calculator::do_separable_stuff(), gammlnguts(), get_blocksize(), get_hessian(), get_local_nvar(), get_nvar(), initialize(), inv_cumd_beta_stable(), inv_cumd_gamma(), inv_cumd_normal_logistic_mixture(), inv_cumd_normal_mixture(), mypow(), df1b2function1::operator()(), df1b2function2::operator()(), operator*(), operator+(), operator+=(), operator-(), operator-=(), operator/(), operator=(), pow(), print_derivatives(), read_pass1_1(), read_pass1_1_dv(), read_pass1_1x(), read_pass1_2(), read_pass1_2_dv(), read_pass1_2x(), read_pass1_3(), read_pass1_3_dv(), read_pass1_3x(), read_pass1_eq_1(), read_pass1_eq_2(), read_pass1_eq_3(), read_pass1_init_1(), read_pass1_init_2(), read_pass1_init_3(), read_pass1_minus_eq_1(), read_pass1_minus_eq_2(), read_pass1_minus_eq_3(), read_pass1_plus_eq_1(), read_pass1_plus_eq_2(), read_pass1_plus_eq_3(), read_pass2_1(), read_pass2_1_dvdv(), read_pass2_1_dvdvdv(), read_pass2_1_minus(), read_pass2_1_minuscv(), read_pass2_1_minusvc(), read_pass2_1_prod(), read_pass2_1_prod_vector(), read_pass2_1_prodc1(), read_pass2_1_prodc2(), read_pass2_1_sum(), read_pass2_1_sumc(), read_pass2_2(), read_pass2_2_dvdv(), read_pass2_2_dvdvdv(), read_pass2_2_minus(), read_pass2_2_minuscv(), read_pass2_2_minusvc(), read_pass2_2_prod(), read_pass2_2_prod_vector(), read_pass2_2_prodc1(), read_pass2_2_prodc2(), read_pass2_2_sum(), read_pass2_2_sumc(), read_pass2_3(), read_pass2_3_dvdv(), read_pass2_3_dvdvdv(), read_pass2_3_minus(), read_pass2_3_minuscv(), read_pass2_3_minusvc(), read_pass2_3_prod(), read_pass2_3_prod_vector(), read_pass2_3_prodc1(), read_pass2_3_prodc2(), read_pass2_3_sum(), read_pass2_3_sumc(), read_tilde_values_1(), read_tilde_values_2(), read_tilde_values_3(), restore_adpool_pointer(), save_adpool_pointer(), set_dependent_variable(), set_nvar(), sin(), df1b2_gradlist::write_pass1(), df1b2_gradlist::write_pass1_prod(), and df1b2_gradlist::write_pass1x().

unsigned int df1b2variable::nvar_vector

static

Definition at line 288 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::check_pool_size(), cleanup_laplace_stuff(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::limited_memory_quasi_newton_block(), function_minimizer::prof_minimize_re(), function_minimizer::quasi_newton_block(), and function_minimizer::trust_region_update().

int df1b2variable::passnumber =0

static

Definition at line 289 of file df1b2fun.h.

Referenced by ad_read_pass1(), ad_read_pass1_der_values(), ad_read_pass1_eq(), ad_read_pass1_initialize(), ad_read_pass1_minus_eq(), ad_read_pass1_plus_eq(), ad_read_pass1x(), ad_read_pass2(), ad_read_pass2_dvdv(), ad_read_pass2_dvdvdv(), ad_read_pass2_minus(), ad_read_pass2_minuscv(), ad_read_pass2_minusvc(), ad_read_pass2_prod(), ad_read_pass2_prod_vector(), ad_read_pass2_prodc1(), ad_read_pass2_prodc2(), ad_read_pass2_sum(), ad_read_pass2_sumc(), ad_read_write_tilde_values(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::default_calculations_check_derivatives(), df1b2_gradcalc1(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_banded(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_banded_adjoint(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_block_diagonal(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_importance_sampling_adjoint(), laplace_approximation_calculator::do_separable_stuff_newton_raphson_banded(), laplace_approximation_calculator::do_separable_stuff_newton_raphson_block_diagonal(), laplace_approximation_calculator::do_separable_stuff_x_u_block_diagonal(), laplace_approximation_calculator::get_block_diagonal_hessian(), laplace_approximation_calculator::get_complete_hessian(), get_newton_raphson_info(), laplace_approximation_calculator::get_newton_raphson_info(), get_passnumber(), get_second_ders(), and print_derivatives().

adpool * df1b2variable::pool = NULL

static

Definition at line 273 of file df1b2fun.h.

Referenced by allocate(), funnel_init_var::allocate_all(), laplace_approximation_calculator::check_pool_size(), cleanup_laplace_stuff(), df1b2variable(), laplace_approximation_calculator::do_separable_stuff(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::limited_memory_quasi_newton_block(), function_minimizer::prof_minimize_re(), function_minimizer::quasi_newton_block(), restore_adpool_pointer(), save_adpool_pointer(), set_blocksize(), function_minimizer::trust_region_update(), and laplace_approximation_calculator::~laplace_approximation_calculator().

int df1b2variable::pool_allocation_number

static

Definition at line 276 of file df1b2fun.h.

double* df1b2variable::ptr

Definition at line 269 of file df1b2fun.h.

Referenced by allocate(), allocated(), deallocate(), df1b2variable(), get_local_nvar(), initialize(), operator=(), and unallocated().

---

The documentation for this class was generated from the following files:

• df1b2fun.h (Last Changed on March 03, 2021 for git-revision cda0a6471fe939023cc5a7d6a0b074c9adc64c77.)
• df1b2f15.cpp (Last Changed on April 22, 2014 for git-revision 219a09ff06fd9cee4c006dd85abbefca00beea03.)
• df1b2fn2.cpp (Last Changed on January 24, 2022 for git-revision 74757431d83636e29cb5726a0bcd75902dacd0d9.)
• df1b2fn3.cpp (Last Changed on June 08, 2022 for git-revision 0c624bed3efd5b55a8082f4e248f3ba94492f59f.)
• df1b2fn4.cpp (Last Changed on June 30, 2022 for git-revision 995095ddc13dd252ede63ff4bbcd076ae9140ec2.)
• df1b2fn5.cpp (Last Changed on January 24, 2022 for git-revision 74757431d83636e29cb5726a0bcd75902dacd0d9.)
• df1b2fn8.cpp (Last Changed on January 24, 2022 for git-revision 74757431d83636e29cb5726a0bcd75902dacd0d9.)
• df1b2fun.cpp (Last Changed on November 10, 2014 for git-revision 459668dbb0187e4e7ff52b0cccea5bd86f46d9d0.)
• df1b2glo.cpp (Last Changed on March 03, 2021 for git-revision cda0a6471fe939023cc5a7d6a0b074c9adc64c77.)
• df32fun.cpp (Last Changed on March 21, 2021 for git-revision d7a1aac0b5ce3ff62c918d4a373492769eb5607f.)
• df33fun.cpp (Last Changed on March 21, 2021 for git-revision a5a10ff6fdc532ce865cdaeb55ee005dac23ee00.)
• df3fun.cpp (Last Changed on March 21, 2021 for git-revision a5a10ff6fdc532ce865cdaeb55ee005dac23ee00.)