Description not yet available. More...

#include <admodel.h>

Public Member Functions
	param_init_vector ()
	Default constructor. More...

virtual void	add_value (const dvector &, const dvector &, const int &, const double &, const dvector &)

virtual void	add_value (const dvector &, const int &)

void	allocate (int imin, int imax, int phasestart=1, const char *s="UNNAMED")
	Allocate variable vector of parameters, then reads values from input data. More...

void	allocate (const ad_integer &imin, const ad_integer &imax, const ad_integer &phasestart=1, const char *s="UNNAMED")
	Allocate param_init_vector with dimension imin to imax using specified phase_start. More...

void	allocate (int imin, int imax, const char *s="UNNAMED")

void	allocate (int imin, int imax, const ivector &ishare, const char *s="UNNAMED")

virtual void	bsave_value (uostream &uos)

virtual void	copy_value_to_vector (const dvector &x, const int &ii)

virtual void	curv_scale (const dvector &d, const dvector &x, const int &)

virtual void	dev_correction (const dmatrix &H, const int &ii)

virtual void	get_jacobian (const dvector &, const dvector &, const int &)

shareinfo *	get_share_flags () const

virtual void	hess_scale (const dvector &, const dvector &, const int &)

virtual const char *	label (void)

virtual void	mc_scale (const dvector &d, const dvector &x, const int &)
	Description not yet available. More...

param_init_vector &	operator= (const dvector &)
	Author: David Fournier Copyright (c) 2008-2012 Regents of the University of California. More...

param_init_vector &	operator= (const dvar_vector &)
	Assigns values from varvec to param_init_vector. More...

param_init_vector &	operator= (const prevariable &)
	Assigns value var to param_init_vector. More...

param_init_vector &	operator= (const double &)
	Assigns value val to param_init_vector. More...

void	pvm_pack (void)

void	pvm_unpack (void)

void	report_value (void)

virtual void	restore_value (const ifstream &ifs)

virtual void	restore_value_from_vector (const dvector &, const int &)

virtual void	save_value (ofstream &ofs)

virtual void	save_value (const ofstream &ofs, int prec)
	Write values of param_init_matrix into output stream _ofs. More...

virtual void	save_value (const ofstream &ofs, int prec, const dvector &, int &offset)
	Write values of g into output stream _ofs, then update offset index to the next set of data. More...

virtual void	sd_scale (const dvector &d, const dvector &x, const int &)

virtual void	sd_vscale (const dvar_vector &d, const dvar_vector &x, const int &ii)

virtual void	set_simulation_bounds (const dmatrix &symbds, const int &ii)

virtual void	set_value (const dvar_vector &x, const int &ii, const dvariable &pen)

virtual void	set_value_inv (const dvector &x, const int &ii)

virtual void	setshare (const index_type &sf, const index_type &af)

virtual void	shared_set_value (const dvar_vector &, const int &, const dvariable &pen)

virtual void	shared_set_value_inv (const dvector &, const int &)

virtual int	shared_size_count (void)

virtual unsigned int	size_count () const
	Returns the number of active parameters. More...

Public Member Functions inherited from named_dvar_vector
	named_dvar_vector (void)

void	allocate (int mmin, int mmax, const char *s)

void	allocate (const char *s)

named_dvar_vector &	operator= (const dvar_vector &m)

named_dvar_vector &	operator= (const dvector &m)

named_dvar_vector &	operator= (const double m)

named_dvar_vector &	operator= (const prevariable &m)

Public Member Functions inherited from dvar_vector
	dvar_vector (const dvar_vector &)
	Copy constructor. More...

	dvar_vector (const predvar_vector &)
	Description not yet available. More...

	dvar_vector ()
	Default constructor. More...

	dvar_vector (int ncl, int ncu)
	Description not yet available. More...

	dvar_vector (int ncl, int ncu, kkludge_object)
	Description not yet available. More...

	dvar_vector (unsigned int sz, double *x)
	Description not yet available. More...

	dvar_vector (const independent_variables &)
	Description not yet available. More...

	dvar_vector (const param_init_number_vector &)
	Description not yet available. More...

	dvar_vector (const param_init_bounded_number_vector &)
	Description not yet available. More...

	dvar_vector (const dvector &)
	Description not yet available. More...

	dvar_vector (const char *)

	~dvar_vector ()
	Destructor. More...

void	allocate (int, int)
	Allocate dvar_vector with indexmin = ncl and indexmax = nch. More...

void	allocate (void)
	Does not allocate, but initializes dvar_vector to empty. More...

void	allocate (const dvector &)
	Allocate dvar_vector using indexes from v1. More...

void	allocate (const dvar_vector &)
	Allocate dvar_vector using indexes from v1. More...

void	allocate (const ad_integer &, const ad_integer &)
	Description not yet available. More...

void	allocatec (const dvar_vector &)
	Description not yet available. More...

void	deallocate ()
	Deallocate dvar_vector memory. More...

prevariable	elem (int i)

prevariable	elem (int i) const

double &	elem_value (int i)

double &	elem_value (int i) const

void	fill (const char *)
	Fill variable vector from values in string s. More...

void	fill_multinomial (const int &seed, const dvector &p)
	Description not yet available. More...

void	fill_multinomial (const random_number_generator &rng, const dvector &p)
	Description not yet available. More...

void	fill_randbi (long int &n, double)
	Description not yet available. More...

void	fill_randbi_ni (long int &n, double)
	Description not yet available. More...

void	fill_randn (long int &n)
	Description not yet available. More...

void	fill_randn_ni (long int &n)
	Description not yet available. More...

void	fill_randnegbinomial (double lambda, double tau, const random_number_generator &rng)
	Description not yet available. More...

void	fill_randpoisson (double lambda, const random_number_generator &rng)
	Description not yet available. More...

void	fill_randu (long int &n)
	Description not yet available. More...

void	fill_randu_ni (long int &n)
	Description not yet available. More...

void	fill_seqadd (double, double)
	Description not yet available. More...

unsigned int	get_ncopies () const

double_and_int *	get_va ()

double_and_int *	get_va () const

int	indexmax () const

int	indexmin () const

void	initialize (const dvector &ww)
	Description not yet available. More...

void	initialize (void)
	Description not yet available. More...

double *	initpointer (void)

const double *	initpointer (void) const

int	operator! (void) const

dvar_vector	operator() (int lb, int ub)

prevariable	operator() (int i)

const prevariable	operator() (int i) const

dvar_vector	operator() (const lvector &)
	Description not yet available. More...

dvar_vector	operator() (const ivector &u)
	Description not yet available. More...

dvar_vector &	operator*= (const prevariable &d)
	Description not yet available. More...

dvar_vector &	operator*= (double d)
	Description not yet available. More...

dvar_vector &	operator++ (void)

dvar_vector &	operator+= (const prevariable &d)
	Adds d to each element of dvar_vector. More...

dvar_vector &	operator+= (double d)
	Adds d to each element of dvar_vector. More...

dvar_vector &	operator+= (const dvector &v1)
	Description not yet available. More...

dvar_vector &	operator+= (const dvar_vector &v1)
	Description not yet available. More...

dvar_vector	operator- ()
	Description not yet available. More...

dvar_vector &	operator-- (void)

dvar_vector &	operator-= (const prevariable &d)
	Substracts d from each element of dvar_vector. More...

dvar_vector &	operator-= (double d)
	Substracts d from each element of dvar_vector. More...

dvar_vector &	operator-= (const dvector &v1)
	Description not yet available. More...

dvar_vector &	operator-= (const dvar_vector &v1)
	Description not yet available. More...

dvar_vector &	operator/= (const prevariable &d)
	Description not yet available. More...

dvar_vector &	operator/= (double d)
	Description not yet available. More...

dvar_vector &	operator= (const dvar_vector &t)
	Assign values from other t to dvar_vector. More...

dvar_vector &	operator= (const dvector &t)
	Description not yet available. More...

dvar_vector &	operator= (double t)
	Assigns all elements for dvar_vector with t. More...

dvar_vector &	operator= (const prevariable &t)
	Assigns all elements for dvar_vector with t. More...

prevariable	operator[] (int i)

const prevariable	operator[] (int i) const

void	read_from (const istream &)
	Description not yet available. More...

void	read_from (const uistream &)
	Description not yet available. More...

void	save_dvar_vector_position () const
	Description not yet available. More...

void	save_dvar_vector_value () const
	Saves the size, address, and value information for a dvar_vector. More...

void	shallow_copy (const dvar_vector &)
	Shallow copy other data structure pointers. More...

dvar_vector &	shift (int min)
	Description not yet available. More...

unsigned int	size () const

dvar_vector	sub (int lb, int ub)

void	write_on (const ostream &) const
	Description not yet available. More...

void	write_on (const uostream &) const
	Description not yet available. More...

Public Member Functions inherited from model_name_tag
	model_name_tag (void)

void	allocate (const char *s)

const char *	get_name (void)

label_class	label (void)

Public Member Functions inherited from initial_params
	initial_params (void)
	Default constructor. More...

virtual void	add_to_list (void)

void	allocate (int _phase_start)

double	get_initial_value (void)

int	get_phase_start (void)

double	get_scalefactor ()

void	restore_phase_start (void)

void	set_active_flag (void)

void	set_inactive_flag (void)

void	set_initial_value (double x)

virtual void	set_only_random_effects_active ()

virtual void	set_only_random_effects_inactive ()

void	set_phase_start (int x)

virtual void	set_random_effects_active ()

virtual void	set_random_effects_inactive ()

void	set_scalefactor (const double)

Friends
class	param_init_vector_vector

Additional Inherited Members
Static Public Member Functions inherited from initial_params
static void	add_random_vector (const dvector &x)
	Author: David Fournier Copyright (c) 2008-2012 Regents of the University of California. More...

static void	add_random_vector (const dvector &y, const dvector &x, const double &ll, const dvector &diag)

static void	copy_all_values (const dvector &x, const int &ii)

static int	correct_for_dev_objects (const dmatrix &H)

static void	get_jacobian_value (const dvector &y, const dvector &jac)

static adstring	get_reportfile_name (void)

static int	montecarlo_scale (const dvector &d, const dvector &x)
	Description not yet available. More...

static int	num_active_calc (void)

static int	nvarcalc ()

static int	nvarcalc_all (void)
	Description not yet available. More...

static void	read (void)

static dvariable	reset (const dvar_vector &x)

static dvariable	reset (const dvector &x)

static dvariable	reset (const dvar_vector &x, const dvector &pen)

static dvariable	reset1 (const dvar_vector &x, const dvector &g)

static dvariable	reset_all (const dvar_vector &x, const dvector &pen)
	Description not yet available. More...

static void	restore (const ifstream &ifs)

static void	restore_all_values (const dvector &x, const int &ii)

static void	restore_start_phase (void)

static void	save (void)

static void	save (const ofstream &ofs, int prec)
	Author: David Fournier Copyright (c) 2008-2014 Regents of the University of California. More...

static void	save_all (const ofstream &_ofs, int prec, const dvector &g)
	Write all values of g into output stream _ofs. More...

static void	set_active_only_random_effects (void)

static void	set_active_random_effects (void)

static void	set_all_simulation_bounds (const dmatrix &symbds)

static void	set_all_simulation_bounds (const dmatrix &symbds, const dvector &)

static void	set_inactive_only_random_effects (void)

static void	set_inactive_random_effects (void)

static int	stddev_curvscale (const dvector &d, const dvector &x)

static int	stddev_scale (const dvector &d, const dvector &x)

static int	stddev_vscale (const dvar_vector &d, const dvar_vector &x)

static void	xinit (const dvector &x)

static void	xinit1 (const dvector &x, const dvector &g)

static void	xinit_all (const dvector &x)
	Description not yet available. More...

Public Attributes inherited from dvar_vector
int	index_max

int	index_min

arr_link *	link_ptr

vector_shapex *	shape

double_and_int *	va

Public Attributes inherited from initial_params
int	phase_save

int	phase_start

int	phase_stop

Static Public Attributes inherited from initial_params
static int	current_phase =1

static bool	in_hessian_phase = false

static int	max_num_initial_params = 0

static int	max_number_phases =1

static int	mc_phase =0

static int	mceval_phase =0

static int	num_active_initial_params

static int	num_initial_params = 0

static int	restart_phase =0

static int	sd_phase =0

static int	straight_through_flag =0

static adlist_ptr	varsptr

Protected Member Functions inherited from initial_params
virtual	~initial_params ()
	Destructor. More...

Protected Attributes inherited from model_name_tag
adstring	name

Protected Attributes inherited from initial_params
int	active_flag

double	initial_value

int	initial_value_flag

double	scalefactor

shareinfo *	share_flags

Detailed Description

Description not yet available.

Parameters

Definition at line 968 of file admodel.h.

Constructor & Destructor Documentation

param_init_vector::param_init_vector ( )

Default constructor.

Definition at line 730 of file model.cpp.

Member Function Documentation

void param_init_vector::add_value	(	const dvector &	y,
		const dvector &	ndev,
		const int &	_ii,
		const double &	s,
		const dvector &	diag
	)

virtual

Implements initial_params.

Definition at line 210 of file montebds.cpp.

void param_init_vector::add_value	(	const dvector &	ndev,
		const int &	_ii
	)

virtual

Implements initial_params.

Definition at line 33 of file mod_mc1.cpp.

void param_init_vector::allocate	(	int	imin,
		int	imax,
		int	_phase_start = `1`,
		const char *	s = `"UNNAMED"`
	)

Allocate variable vector of parameters, then reads values from input data.

Parameters

imin	lower vector index
imax	upper vector index
_phase_start
s	parameter id

Definition at line 766 of file model.cpp.

Referenced by param_init_vector_vector::allocate().

void param_init_vector::allocate	(	const ad_integer &	imin,
		const ad_integer &	imax,
		const ad_integer &	_phase_start = `1`,
		const char *	s = `"UNNAMED"`
	)

Allocate param_init_vector with dimension imin to imax using specified phase_start.

Note: May read values from either global parfile or bparfile.

Parameters

imin	lower vector index
imax	upper vector index
phase_start	specified starting phase
s	is the id

Definition at line 96 of file model43.cpp.

void param_init_vector::allocate	(	int	imin,
		int	imax,
		const char *	s = `"UNNAMED"`
	)

Definition at line 859 of file model.cpp.

void param_init_vector::allocate	(	int	imin,
		int	imax,
		const ivector &	ishare,
		const char *	s = `"UNNAMED"`
	)

void param_init_vector::bsave_value ( uostream & uos )

virtual

Implements initial_params.

Definition at line 742 of file model.cpp.

void param_init_vector::copy_value_to_vector	(	const dvector &	x,
		const int &	ii
	)

virtual

Implements initial_params.

Definition at line 31 of file model3.cpp.

void param_init_vector::curv_scale	(	const dvector &	d,
		const dvector &	x,
		const int &	_ii
	)

virtual

Implements initial_params.

Definition at line 32 of file model19.cpp.

void param_init_vector::dev_correction	(	const dmatrix &	H,
		const int &	ii
	)

virtual

Implements initial_params.

Definition at line 36 of file model23.cpp.

void param_init_vector::get_jacobian	(	const dvector &	y,
		const dvector &	ndev,
		const int &	_ii
	)

virtual

Implements initial_params.

Definition at line 357 of file montebds.cpp.

shareinfo* param_init_vector::get_share_flags ( ) const

inline

Definition at line 1026 of file admodel.h.

virtual void param_init_vector::hess_scale	(	const dvector &	,
		const dvector &	,
		const int &
	)

inlinevirtual

Implements initial_params.

Definition at line 1004 of file admodel.h.

const char * param_init_vector::label ( void )

virtual

Implements initial_params.

Definition at line 252 of file model11.cpp.

Referenced by save_value().

void param_init_vector::mc_scale	(	const dvector &	_v,
		const dvector &	x,
		const int &	_ii
	)

virtual

Description not yet available.

Parameters

Implements initial_params.

Definition at line 92 of file mc_scale.cpp.

param_init_vector & param_init_vector::operator= ( const dvector & vec )

Assigns values from vec to param_init_vector.

Parameters

vec	dvector with same dimensions as param_init_vector.

Returns: param_init_vector with same element values as vec.

Definition at line 13 of file model20.cpp.

Referenced by dll_param_init_vector::operator=().

param_init_vector & param_init_vector::operator= ( const dvar_vector & varvec )

Assigns values from varvec to param_init_vector.

Parameters

varvec dvar_vector with same dimensions as param_init_vector.

Returns: param_init_vector with same element values as varvec.

Definition at line 24 of file model20.cpp.

param_init_vector & param_init_vector::operator= ( const prevariable & var )

Assigns value var to param_init_vector.

Parameters

varvec dvar_vector with same dimensions as param_init_vector.

Returns: param_init_vector with same element values as varvec.

Definition at line 35 of file model20.cpp.

param_init_vector & param_init_vector::operator= ( const double & val )

Assigns value val to param_init_vector.

Parameters

varvec dvar_vector with same dimensions as param_init_vector.

Returns: param_init_vector with same element values as varvec.

Definition at line 46 of file model20.cpp.

void param_init_vector::pvm_pack ( void )

inlinevirtual

Implements initial_params.

Definition at line 982 of file admodel.h.

void param_init_vector::pvm_unpack ( void )

inlinevirtual

Implements initial_params.

Definition at line 983 of file admodel.h.

void param_init_vector::report_value ( void )

void param_init_vector::restore_value ( const ifstream & ifs )

virtual

Implements initial_params.

Definition at line 26 of file model13.cpp.

void param_init_vector::restore_value_from_vector	(	const dvector &	x,
		const int &	ii
	)

virtual

Implements initial_params.

Definition at line 129 of file model3.cpp.

void param_init_vector::save_value ( ofstream & ofs )

virtual

Implements initial_params.

Definition at line 736 of file model.cpp.

void param_init_vector::save_value	(	const ofstream &	_ofs,
		int	precision
	)

virtual

Write values of param_init_matrix into output stream _ofs.

Parameters

_ofs	output stream
precision	sets the floating point precision

Implements initial_params.

Definition at line 47 of file model12.cpp.

void param_init_vector::save_value	(	const ofstream &	_ofs,
		int	precision,
		const dvector &	g,
		int &	offset
	)

virtual

Write values of g into output stream _ofs, then update offset index to the next set of data.

Parameters

_ofs	output stream
precision	sets the floating point precision
g	the data to output
offset	beginning index for g for param_init_matrix

Implements initial_params.

Definition at line 109 of file model12.cpp.

void param_init_vector::sd_scale	(	const dvector &	d,
		const dvector &	x,
		const int &	_ii
	)

virtual

Implements initial_params.

Definition at line 51 of file model10.cpp.

void param_init_vector::sd_vscale	(	const dvar_vector &	d,
		const dvar_vector &	x,
		const int &	ii
	)

virtual

Implements initial_params.

Definition at line 29 of file model53.cpp.

void param_init_vector::set_simulation_bounds	(	const dmatrix &	symbds,
		const int &	ii
	)

virtual

Implements initial_params.

Definition at line 56 of file montebds.cpp.

void param_init_vector::set_value	(	const dvar_vector &	x,
		const int &	ii,
		const dvariable &	pen
	)

virtual

Implements initial_params.

Definition at line 688 of file model.cpp.

void param_init_vector::set_value_inv	(	const dvector &	x,
		const int &	ii
	)

virtual

Implements initial_params.

Definition at line 697 of file model.cpp.

void param_init_vector::setshare	(	const index_type &	sf,
		const index_type &	af
	)

virtual

Reimplemented from initial_params.

Definition at line 567 of file shared.cpp.

void param_init_vector::shared_set_value	(	const dvar_vector &	_x,
		const int &	_ii,
		const dvariable &	pen
	)

virtual

Reimplemented from initial_params.

Definition at line 125 of file shared.cpp.

void param_init_vector::shared_set_value_inv	(	const dvector &	_x,
		const int &	_ii
	)

virtual

Reimplemented from initial_params.

Definition at line 70 of file shared.cpp.

int param_init_vector::shared_size_count ( void )

virtual

Reimplemented from initial_params.

Definition at line 46 of file shared.cpp.

unsigned int param_init_vector::size_count ( ) const

virtual

Returns the number of active parameters.

Implements initial_params.

Definition at line 724 of file model.cpp.

Referenced by dev_correction().

Friends And Related Function Documentation

friend class param_init_vector_vector

friend

Definition at line 1021 of file admodel.h.

The documentation for this class was generated from the following files:

Public Member Functions

Friends

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Friends And Related Function Documentation