active_flag | initial_params | protected |
add_random_vector(const dvector &x) | initial_params | static |
add_random_vector(const dvector &y, const dvector &x, const double &ll, const dvector &diag) | initial_params | static |
add_to_list(void) | initial_params | virtual |
add_value(const dvector &, const dvector &, const int &, const double &, const dvector &) | param_init_d3array | virtual |
add_value(const dvector &, const int &) | param_init_d3array | virtual |
allocate(const ad_integer &sl, const ad_integer &sh, const index_type &nrl, const index_type &nrh, const index_type &ncl, const index_type &nch, const char *s="UNNAMED") | param_init_d3array | |
allocate(const ad_integer &sl, const ad_integer &sh, const index_type &nrl, const index_type &nrh, const index_type &ncl, const index_type &nch, int phase_start=1, const char *s="UNNAMED") | param_init_d3array | |
allocate(int smin, int smax, int rmin, int rmax, int cmin, int cmax, int phase_start=1, const char *="UNNAMED") | param_init_d3array | |
allocate(int smin, int smax, int rmin, int rmax, int cmin, int cmax, const char *="UNNAMED") | param_init_d3array | |
named_dvar3_array::allocate(int hsl, int hsu, int rmin, int rmax, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(int hsl, int hsu, const index_type &rmin, const index_type &rmax, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(int hsl, int hsu, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(int hsl, int hsu, const ivector &rmin, int rmax, int cmin, int cmax, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(int hsl, int hsu, int rmin, const ivector &rmax, int cmin, int cmax, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(int hsl, int hsu, const ivector &rmin, const ivector &rmax, int cmin, int cmax, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(int hsl, int hsu, int rmin, int rmax, const ivector &cmin, int cmax, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(int hsl, int hsu, int rmin, int rmax, const ivector &cmin, const ivector &cmax, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::allocate(int hsl, int hsu, int rmin, int rmax, int cmin, const ivector &cmax, const char *s="UNNAMED") | named_dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, int nrl, int nrh, int ncl, int nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, int nrl, int nrh) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, const index_type &nrl, const index_type &nrh) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, int nrl, int nrh, const ivector &ncl, int nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(const d3_array &m1) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(void) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(const dvar3_array &m1) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, int nrl, int nrh, const ivector &ncl, const ivector &nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, const ivector &nrl, const ivector &nrh, const ivector &ncl, const ivector &nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, const ivector &nrl, const ivector &nrh, int ncl, int nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, const ivector &nrl, int nrh, int ncl, int nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, int nrl, const ivector &nrh, int ncl, int nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, int nrl, const ivector &nrh, int ncl, const ivector &nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(int sl, int sh, int nrl, int nrh, int ncl, const ivector &nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(ad_integer sl, ad_integer sh, const index_type &nrl, const index_type &nrh, const index_type &ncl, const index_type &nch) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(ad_integer sl, ad_integer sh, const index_type &nrl, const index_type &nrh) | dvar3_array | |
named_dvar3_array::dvar3_array::allocate(ad_integer sl, ad_integer sh) | dvar3_array | |
initial_params::allocate(int _phase_start) | initial_params | |
bsave_value(uostream &uos) | param_init_d3array | virtual |
colmax(void) const | dvar3_array | inline |
colmin() const | dvar3_array | inline |
colsize() const | dvar3_array | inline |
copy_all_values(const dvector &x, const int &ii) | initial_params | static |
copy_value_to_vector(const dvector &x, const int &ii) | param_init_d3array | virtual |
correct_for_dev_objects(const dmatrix &H) | initial_params | static |
current_phase | initial_params | static |
curv_scale(const dvector &d, const dvector &x, const int &ii) | param_init_d3array | virtual |
deallocate() | dvar3_array | |
dev_correction(const dmatrix &, const int &) | param_init_d3array | virtual |
dvar3_array(int, int) | dvar3_array | |
dvar3_array(int sl, int sh, int nrl, int nrh, int ncl, int nch) | dvar3_array | |
dvar3_array(int sl, int sh, int nrl, int nrh, const ivector &ncl, int nch) | dvar3_array | |
dvar3_array(int sl, int sh, const ivector &nrl, const ivector &nrh, ivector &ncl, const ivector &nch) | dvar3_array | |
dvar3_array(int sl, int sh, int nrl, const ivector &nrh, int ncl, const ivector &nch) | dvar3_array | |
dvar3_array(int sl, int sh, int nrl, const ivector &nrh, int ncl, int nch) | dvar3_array | |
dvar3_array(ad_integer sl, ad_integer sh, const index_type &nrl, const index_type &nrh, const index_type &ncl, const index_type &nch) | dvar3_array | |
dvar3_array(const d3_array &m2) | dvar3_array | |
dvar3_array(const param_init_matrix_vector &m2) | dvar3_array | |
dvar3_array(const param_init_bounded_matrix_vector &m2) | dvar3_array | |
dvar3_array(const dvar3_array &m2) | dvar3_array | |
dvar3_array(void) | dvar3_array | |
elem(int i) | dvar3_array | inline |
elem(int i, int j, int k) | dvar3_array | inline |
elem(int i) const | dvar3_array | inline |
elem(int i, int j, int k) const | dvar3_array | inline |
fill_randn(long int &n) | dvar3_array | |
fill_randn_ni(long int &n) | dvar3_array | |
fill_randu(long int &n) | dvar3_array | |
fill_randu_ni(long int &n) | dvar3_array | |
fill_seqadd(double, double) | dvar3_array | |
get_initial_value(void) | initial_params | |
get_jacobian(const dvector &, const dvector &, const int &) | param_init_d3array | virtual |
get_jacobian_value(const dvector &y, const dvector &jac) | initial_params | static |
get_name(void) | model_name_tag | inline |
get_ncopies() const | dvar3_array | inline |
get_phase_start(void) | initial_params | |
get_reportfile_name(void) | initial_params | static |
get_scalefactor() | initial_params | |
hess_scale(const dvector &d, const dvector &x, const int &ii) | param_init_d3array | virtual |
in_hessian_phase | initial_params | static |
indexmax() const | dvar3_array | inline |
indexmin() const | dvar3_array | inline |
initial_params(void) | initial_params | |
initial_value | initial_params | protected |
initial_value_flag | initial_params | protected |
initialize(void) | dvar3_array | |
label(void) | param_init_d3array | virtual |
max_num_initial_params | initial_params | static |
max_number_phases | initial_params | static |
mc_phase | initial_params | static |
mc_scale(const dvector &d, const dvector &x, const int &) | param_init_d3array | virtual |
mceval_phase | initial_params | static |
model_name_tag(void) | model_name_tag | inline |
montecarlo_scale(const dvector &d, const dvector &x) | initial_params | static |
name | model_name_tag | protected |
named_dvar3_array(void) | named_dvar3_array | inline |
num_active_calc(void) | initial_params | static |
num_active_initial_params | initial_params | static |
num_initial_params | initial_params | static |
nvarcalc() | initial_params | static |
nvarcalc_all(void) | initial_params | static |
operator!(void) const | dvar3_array | inline |
operator()(int k, int i, int j) const | dvar3_array | inline |
operator()(int k, int i) const | dvar3_array | inline |
operator()(int i) const | dvar3_array | inline |
operator()(int k, int i, int j) | dvar3_array | inline |
operator()(int k, int i) | dvar3_array | inline |
operator()(int i) | dvar3_array | inline |
operator/=(const prevariable &) | dvar3_array | |
operator/=(double) | dvar3_array | |
operator=(const dvar3_array &m) | named_dvar3_array | |
operator=(const d3_array &m) | named_dvar3_array | |
dvar3_array::operator=(double x) | dvar3_array | |
operator[](int i) const | dvar3_array | inline |
operator[](int i) | dvar3_array | inline |
param_init_d3array(void) | param_init_d3array | |
phase_save | initial_params | |
phase_start | initial_params | |
phase_stop | initial_params | |
pvm_pack(void) | param_init_d3array | inlinevirtual |
pvm_unpack(void) | param_init_d3array | inlinevirtual |
read(void) | initial_params | static |
report_value(void) | param_init_d3array | |
reset(const dvar_vector &x) | initial_params | static |
reset(const dvector &x) | initial_params | static |
reset(const dvar_vector &x, const dvector &pen) | initial_params | static |
reset1(const dvar_vector &x, const dvector &g) | initial_params | static |
reset_all(const dvar_vector &x, const dvector &pen) | initial_params | static |
restart_phase | initial_params | static |
restore(const ifstream &ifs) | initial_params | static |
restore_all_values(const dvector &x, const int &ii) | initial_params | static |
restore_phase_start(void) | initial_params | |
restore_start_phase(void) | initial_params | static |
restore_value(const ifstream &ifs) | param_init_d3array | virtual |
restore_value_from_vector(const dvector &, const int &) | param_init_d3array | virtual |
rowmax(void) const | dvar3_array | inline |
rowmin(void) const | dvar3_array | inline |
rowsize() const | dvar3_array | inline |
save(void) | initial_params | static |
save(const ofstream &ofs, int prec) | initial_params | static |
save_all(const ofstream &_ofs, int prec, const dvector &g) | initial_params | static |
save_value(ofstream &ofs) | param_init_d3array | virtual |
save_value(const ofstream &ofs, int prec) | param_init_d3array | virtual |
save_value(const ofstream &ofs, int prec, const dvector &, int &offset) | param_init_d3array | inlinevirtual |
scalefactor | initial_params | protected |
sd_phase | initial_params | static |
sd_scale(const dvector &d, const dvector &x, const int &ii) | param_init_d3array | virtual |
sd_vscale(const dvar_vector &d, const dvar_vector &x, const int &ii) | param_init_d3array | virtual |
set_active_flag(void) | initial_params | |
set_active_only_random_effects(void) | initial_params | static |
set_active_random_effects(void) | initial_params | static |
set_all_simulation_bounds(const dmatrix &symbds) | initial_params | static |
set_all_simulation_bounds(const dmatrix &symbds, const dvector &) | initial_params | static |
set_inactive_flag(void) | initial_params | |
set_inactive_only_random_effects(void) | initial_params | static |
set_inactive_random_effects(void) | initial_params | static |
set_initial_value(double x) | initial_params | |
set_only_random_effects_active() | initial_params | virtual |
set_only_random_effects_inactive() | initial_params | virtual |
set_phase_start(int x) | initial_params | |
set_random_effects_active() | initial_params | virtual |
set_random_effects_inactive() | initial_params | virtual |
set_scalefactor(const double) | initial_params | |
set_simulation_bounds(const dmatrix &symbds, const int &ii) | param_init_d3array | virtual |
set_value(const dvar_vector &x, const int &ii, const dvariable &pen) | param_init_d3array | virtual |
set_value_inv(const dvector &x, const int &ii) | param_init_d3array | virtual |
setshare(const index_type &sf, const index_type &af) | param_init_d3array | virtual |
shallow_copy(const dvar3_array &) | dvar3_array | |
share_flags | initial_params | protected |
shared_set_value(const dvar_vector &, const int &, const dvariable &pen) | param_init_d3array | virtual |
shared_set_value_inv(const dvector &, const int &) | param_init_d3array | virtual |
shared_size_count(void) | param_init_d3array | virtual |
size_count() const | param_init_d3array | virtual |
slicemax() const | dvar3_array | inline |
slicemin() const | dvar3_array | inline |
slicesize() const | dvar3_array | inline |
stddev_curvscale(const dvector &d, const dvector &x) | initial_params | static |
stddev_scale(const dvector &d, const dvector &x) | initial_params | static |
stddev_vscale(const dvar_vector &d, const dvar_vector &x) | initial_params | static |
straight_through_flag | initial_params | static |
sub(int, int) | dvar3_array | |
value(const dvar3_array &) | dvar3_array | |
varsptr | initial_params | static |
xinit(const dvector &x) | initial_params | static |
xinit1(const dvector &x, const dvector &g) | initial_params | static |
xinit_all(const dvector &x) | initial_params | static |
~dvar3_array() | dvar3_array | |
~initial_params() | initial_params | protectedvirtual |